Query genomic data across multiple databases via CLI and Python interfaces.
npx skills add https://github.com/ovachiever/droid-tings --skill gget
Please help me install this Agent Skill. Skill: gget Source: https://github.com/ovachiever/droid-tings/tree/main/skills/gget Command: npx skills add https://github.com/ovachiever/droid-tings --skill gget
This Skill provides a CLI and Python package to query a wide range of genomic, proteomic, and functional databases from Ensembl to AlphaFold, UniProt, ARCHS4, OpenTargets, and more, enabling rapid data gathering and integration.
Query Ensembl for a gene, fetch its protein sequence, and retrieve expression data for tissues.
High-intent search queries and answers about installing and using this skill.
gget provides unified CLI and Python interfaces to access 20+ databases—Ensembl, UniProt, NCBI, RCSB PDB, ARCHS4, Open Targets, and others—through consistent commands, eliminating the need to learn separate APIs for each source.
Yes. gget integrates gene search, sequence retrieval, and expression profiling across Ensembl, UniProt, and ARCHS4 in a single pipeline, supporting end-to-end analysis from ID lookup to tissue-level expression output.
gget exports results as JSON and CSV, enabling direct integration into downstream analysis pipelines and compatible with standard bioinformatics workflows.
Yes. gget queries Open Targets and other integrated databases to retrieve disease associations, drug targets, and functional relationships alongside genomic data in programmatic or CLI mode.
gget supports both CLI and Python package interfaces with flexible parameter handling for species, IDs, and sequence translation, enabling batch processing and pipeline automation.
gget performs sequence alignment, enrichment analysis, expression profiling across tissues, protein structure queries via RCSB PDB and AlphaFold, and cross-database metadata retrieval.
jackspaceAccess 40+ bioinformatics services and databases via a unified Python API.
biomaps-infraQuery over 20 bioinformatics databases via command-line and Python interfaces.
Imad-OuteAnalyze DNA, RNA, and protein sequences with alignment and phylogenetic tree construction.
hxk622Query over 20 bioinformatics databases via command-line and Python interfaces.
