Query over 20 bioinformatics databases and perform sequence analysis via command-line or Python.
npx skills add https://github.com/yf8578/clawomics --skill gget-yf8578
Please help me install this Agent Skill. Skill: gget Source: https://github.com/yf8578/clawomics/tree/main/skills/gget Command: npx skills add https://github.com/yf8578/clawomics --skill gget-yf8578
This Skill streamlines complex bioinformatics data retrieval and analysis by providing a unified, user-friendly interface to over 20 specialized databases and tools.
Use the gget skill to search for gene information for 'BRCA1' in human.
High-intent search queries and answers about installing and using this skill.
Yes, you can predict protein structures using AlphaFold and query PDB directly. The tool integrates structural biology functions with sequence analysis, allowing you to retrieve sequences and predict structures without switching environments.
Yes, it supports sequence alignment and BLAST analysis for genomics data. You can perform BLAST, BLAT, MUSCLE alignment, and local alignment using DIAMOND to manipulate and analyze nucleotide and protein sequences effectively.
You can analyze gene expression and find disease associations by querying integrated databases like ARCHS4, CELLxGENE, cBioPortal, and COSMIC. This allows you to identify disease and drug associations for your gene list within a single workflow.
The best way to unify fragmented bioinformatics database queries is using a single interface that connects to over 20 specialized databases. This solves access fragmentation by standardizing data retrieval for genomics, proteomics, and disease data.
Yes, you can use it for cancer genomics data analysis and functional enrichment. It queries cancer genomics databases like cBioPortal and COSMIC, and performs functional annotation to identify enriched pathways and disease associations.
jaechang-hitsProvides programmatic access to European Nucleotide Archive for genomic data retrieval and analysis.
bettercallfanAnalyze Excel and CSV files with SQL queries via DuckDB.
DrugClawQuery public biology databases and APIs for protein, variant, and pathway data.
MubasherMohammedRecommend Bioconductor packages and workflows for bioinformatics analysis tasks.
