hypogenic

Generate and test scientific hypotheses from tabular data and literature using LLMs.

Updated Mar 10, 2026
One-click install
npx skills add https://github.com/Yezez9/Research-Agent --skill hypogenic-yezez9
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: hypogenic
Source: https://github.com/Yezez9/Research-Agent/tree/main/scientific-skills/hypogenic
Command: npx skills add https://github.com/Yezez9/Research-Agent --skill hypogenic-yezez9

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill includes scripts (resource) and references (resource) components.

What problem does it solve?

This Skill automates the generation and testing of scientific hypotheses from tabular data and literature, significantly accelerating the research discovery process.

Core Features & Use Cases

  • Automated Hypothesis Generation: Creates testable hypotheses from data patterns or literature insights.
  • Data-Driven & Literature-Informed: Supports generating hypotheses solely from data (HypoGeniC) or by integrating existing research (HypoRefine, Union methods).
  • Use Case: A researcher studying user behavior on a new app can use this Skill to automatically generate hypotheses about what features drive engagement, based on user interaction logs and relevant academic papers.

Quick Start

Use the hypogenic skill to generate 20 hypotheses from the configuration file located at ./data/your_task/config.yaml.

Frequently Asked Questions about hypogenic

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I automate hypothesis generation from tabular data and literature?

Automate scientific hypothesis generation and testing by applying LLMs to tabular datasets and literature. This process extracts data patterns and research insights to produce testable hypotheses, accelerating research discovery without manual brainstorming.

How does literature-integrated hypothesis testing work?

Literature-integrated hypothesis testing works by combining existing academic papers with tabular data patterns to refine hypotheses. It uses LLMs to parse research insights and validate them against empirical data, yielding grounded and testable scientific propositions.

Can I generate scientific hypotheses solely from CSV data patterns?

Yes, you can generate scientific hypotheses solely from tabular data patterns. By using data-driven approaches, the system analyzes CSV datasets to identify correlations and anomalies, creating testable hypotheses without requiring external literature inputs.

Do I need Python libraries for LLM interaction and PDF parsing to use this?

Yes, you need Python libraries for data processing and LLM interaction to run this workflow. Optional PDF parsing dependencies are also required if you want to integrate existing academic literature into the automated hypothesis generation and testing pipeline.

What is the difference between data-driven and literature-informed hypothesis generation?

Data-driven generation creates hypotheses strictly from tabular data patterns, while literature-informed generation integrates existing research insights. The combined approach merges both methods, using LLMs to validate data anomalies against academic literature for robust scientific discovery.

How do I generate multiple hypotheses from a configuration file?

Generate multiple hypotheses by configuring a YAML file to define your task parameters. The system reads this configuration to automate hypothesis generation and testing across your specified tabular datasets and literature, outputting numerous testable propositions.