hypogenic

Generate and test scientific hypotheses from tabular datasets using Python and Redis.

1|Updated Jan 14, 2026
One-click install
npx skills add https://github.com/Sologa/codex-pipeline --skill hypogenic-sologa
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: hypogenic
Source: https://github.com/Sologa/codex-pipeline/tree/main/.codex/skills/hypogenic
Command: npx skills add https://github.com/Sologa/codex-pipeline --skill hypogenic-sologa

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill includes scripts (resource) and references (resource) and assets (resource) components.

What problem does it solve?

This Skill automates the generation and testing of scientific hypotheses from data and literature, significantly accelerating the research discovery process.

Core Features & Use Cases

  • Automated Hypothesis Generation: Create testable hypotheses from observational data or by integrating existing research papers.
  • Data-Driven & Literature-Informed Approaches: Supports methods like HypoGeniC (data-only) and HypoRefine (literature + data).
  • Use Case: A researcher studying AI-generated content can use this Skill to automatically generate hypotheses about linguistic patterns distinguishing human from AI text, and then test these hypotheses against a dataset.

Quick Start

Use the hypogenic skill to generate 20 hypotheses from the dataset located at ./data/your_task/config.yaml.

Frequently Asked Questions about hypogenic

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I automate hypothesis generation from tabular datasets?

Automating hypothesis generation from tabular datasets is achieved by using LLM-driven methods like HypoGeniC to create and test data-driven hypotheses. This process combines observational data exploration with literature insights to accelerate scientific discovery.

Can I integrate existing literature with data for hypothesis testing?

Yes, you can integrate existing literature with data for hypothesis testing using the HypoRefine method. This approach combines research papers processed via GROBID with your tabular datasets to generate comprehensive, literature-informed scientific hypotheses.

Do I need Python and Redis to run LLM-driven research automation?

Yes, you need Python and Redis to run LLM-driven research automation. Redis is required for caching operations during hypothesis generation, while GROBID is an optional dependency for processing PDF research papers into literature insights.

What is the best way to generate testable scientific hypotheses from observational data?

The best way to generate testable scientific hypotheses from observational data is using an LLM-driven approach like HypoGeniC. It automates data-driven exploration to create testable hypotheses, supporting union methods for comprehensive hypothesis coverage.

Does hypothesis generation work without processing PDF research papers?

Hypothesis generation works without PDF processing by relying solely on tabular datasets through the HypoGeniC method. GROBID for PDF processing is optional, meaning you can generate data-driven hypotheses without extracting literature insights from research papers.

When should I not use literature-informed approaches for scientific discovery?

You should not use literature-informed approaches for scientific discovery when your research lacks relevant existing PDF papers or when you want purely data-driven exploration. In these cases, using data-only methods avoids the need for GROBID PDF processing.