interpro-database
CommunityExplore protein domains and families.
Authorjaechang-hits
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This Skill helps researchers understand the functional and evolutionary relationships of proteins by querying the InterPro database for domain architecture, family classification, and related information.
Core Features & Use Cases
- Domain Architecture: Identify all InterPro entries (domains, families, sites) present in a given protein.
- Family Membership: Find proteins belonging to a specific InterPro family or domain.
- Taxonomic Distribution: Analyze the occurrence of a domain/family across different species.
- Structure Linking: Discover PDB structures associated with InterPro entries.
- Use Case: Given a UniProt accession, quickly list all the protein domains and families it contains to understand its functional potential.
Quick Start
Query the InterPro API for the domain architecture of the protein with UniProt accession P04637.
Dependency Matrix
Required Modules
requestspandasmatplotlib
Components
scriptsreferences
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: interpro-database Download link: https://github.com/jaechang-hits/SciAgent-Skills/archive/main.zip#interpro-database Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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