labarchive-integration

Access LabArchives electronic lab notebook data via REST API.

Updated Mar 10, 2026

Search Tags:#automation #api #eln #labarchives #notebook backup #research data management

Ready to run

npx skills add https://github.com/felixboehm/biochem-allergy --skill labarchive-integration-felixboehm

💬 Prompt for ChatGPT / Claude Chat▼

Please help me install this Agent Skill.
Skill: labarchive-integration
Source: https://github.com/felixboehm/biochem-allergy/tree/main/.claude/skills/labarchive-integration
Command: npx skills add https://github.com/felixboehm/biochem-allergy --skill labarchive-integration-felixboehm

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill requires labarchives-py, and includes scripts (resource) and references (resource) components.

What problem does it solve?

This Skill automates interactions with LabArchives, an electronic lab notebook, reducing manual data entry and improving research documentation efficiency.

Core Features & Use Cases

Notebook Management: Programmatically access, back up, and manage your electronic lab notebooks and their contents.
Data Integration: Seamlessly integrate LabArchives with other scientific tools like Protocols.io, Jupyter, and REDCap.
Use Case: Automatically back up all your lab notebooks nightly, or programmatically create new entries with experimental results and attached data files from your analysis scripts.

Quick Start

Use the labarchive-integration skill to back up your notebook with ID '12345' to the 'backups' directory.

Frequently Asked Questions about labarchive-integration

High-intent search queries and answers about installing and using this skill.

FAQPage Schema

How do I automate LabArchives notebook backups using a Python API?▼

You can automate LabArchives notebook backups by using this Skill to programmatically authenticate and retrieve notebook contents via the REST API. It enables saving your electronic lab notebook data locally to a specified directory using Python scripts.

Can I integrate LabArchives data with Jupyter or REDCap?▼

Yes, you can integrate LabArchives with scientific tools like Jupyter and REDCap. This Skill provides direct API access and a Python wrapper to seamlessly push experimental results and manage entries within third-party scientific software.

What is the best way to programmatically manage electronic lab notebook entries?▼

The best way to manage electronic lab notebook entries is through this Skill's Python wrapper, which interfaces with the LabArchives REST API. It allows you to automatically create new entries, attach data files, and retrieve user information.

Do I need the labarchives-py package to use this API integration?▼

Yes, the labarchives-py package is a required dependency for this integration. You need this Python library installed to authenticate, generate site reports, and handle programmatic interactions with your LabArchives account.

Does the LabArchives REST API support generating site reports?▼

Yes, the LabArchives REST API supports generating site reports through this Skill. You can programmatically retrieve user and notebook information to compile comprehensive site reports for research data management and auditing.

How do I attach data files to LabArchives entries from analysis scripts?▼

You can attach data files to LabArchives entries by using the API to programmatically create new entries from your analysis scripts. This Skill facilitates direct upload and management of attachments within your electronic lab notebook.