labarchive-integration

Automate LabArchives ELN operations via REST API for notebooks, entries, and attachments.

52|6|Updated Nov 24, 2025
One-click install
npx skills add https://github.com/ovachiever/droid-tings --skill labarchive-integration-ovachiever
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: labarchive-integration
Source: https://github.com/ovachiever/droid-tings/tree/main/skills/labarchive-integration
Command: npx skills add https://github.com/ovachiever/droid-tings --skill labarchive-integration-ovachiever

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill requires labarchives-py, requests, pyyaml, and includes scripts (resource) and references (resource) components.

What problem does it solve?

Automates electronic lab notebook (ELN) workflows via LabArchives REST API, enabling notebook access, backups, and integration with protocols, Jupyter, REDCap, and other tools to streamline research documentation and compliance.

Core Features & Use Cases

  • Authentication setup and regional endpoint configuration
  • Notebook listing, backup, and member management
  • Entry & attachment management for experiments
  • Site reports and analytics for institutional usage
  • Third-party integrations (Protocols.io, Jupyter, REDCap, etc.)

Quick Start

Run the LabArchives setup script to configure credentials, authenticate a user, and begin automating notebook backups and entry management.

Frequently Asked Questions about labarchive-integration

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I automate LabArchives notebook backups via API?

Automate notebook backups using LabArchives REST API by setting up authentication with regional endpoints, then calling the backup operation through the provided Python wrapper or HTTP client. The Skill includes example scripts that handle credential configuration and drive end-to-end backup workflows for enterprise ELN systems.

Can I integrate LabArchives with REDCap and Protocols.io?

Yes. This Skill provides third-party integration support for REDCap, Protocols.io, and Jupyter within LabArchives workflows. API methods enable programmatic linking of protocols and data exports, allowing you to synchronize lab documentation across multiple research platforms.

What's the best way to manage lab notebook entries and attachments programmatically?

Use LabArchives REST API to create entries, add comments, upload attachments, and manage parts through authenticated API calls. The Skill provides Python and HTTP client wrappers with example scripts that demonstrate entry creation, attachment uploads, and bulk operations for automated experiment documentation.

Do I need API credentials and regional endpoint configuration to use LabArchives automation?

Yes. Authentication setup and regional endpoint configuration are prerequisites. The Skill includes a setup script that handles credential storage in YAML format, manages API tokens, and routes requests to the correct regional endpoint for your LabArchives instance.

How can I retrieve notebook IDs, member lists, and settings from LabArchives?

Call LabArchives API endpoints for notebook listing, member retrieval, and settings queries using the Python client or HTTP wrappers provided in this Skill. Example scripts show how to extract notebook metadata, user information, and access control settings for institutional reporting and compliance.

What are the limitations when automating LabArchives workflows at scale?

API rate limits, regional endpoint availability, and authentication token expiration are operational constraints. The Skill handles credential refresh and error recovery, but large-scale automation across multiple notebooks may require batching, retry logic, and monitoring of site reports to track institutional usage.