Parse FCS files into NumPy arrays with metadata and channel information.
npx skills add https://github.com/biomaps-infra/blender-opencode --skill lib-flowio
Please help me install this Agent Skill. Skill: lib-flowio Source: https://github.com/biomaps-infra/blender-opencode/tree/main/.opencode/skills/lib-flowio Command: npx skills add https://github.com/biomaps-infra/blender-opencode --skill lib-flowio
This Skill simplifies the complex task of reading, parsing, and extracting data from Flow Cytometry Standard (FCS) files, a common format in biological research.
Use the lib-flowio skill to read the file 'experiment.fcs' and extract its event data as a NumPy array.
High-intent search queries and answers about installing and using this skill.
You can parse FCS flow cytometry files and extract event data as NumPy arrays using this Skill. It leverages the flowio Python library to read metadata, channel information, and events from FCS versions 2.0 through 3.1 for downstream analysis pipelines.
You can convert flow cytometry FCS files to CSV or Pandas DataFrames using this Skill. It extracts event data from FCS files and supports conversion to these formats for straightforward integration into bioinformatics data preprocessing workflows.
To create new FCS files from processed flow cytometry data, use this Skill to generate valid Flow Cytometry Standard files. It builds new FCS files from your manipulated NumPy arrays or event data via the flowio Python library.
This FCS parsing tool does support older flow cytometry file versions including 2.0, 3.0, and 3.1. It reads metadata, channel information, and event data across these FCS versions using the flowio Python library.
You need the flowio Python library installed to parse FCS files with this Skill. All operations for reading metadata, extracting NumPy arrays, and creating new flow cytometry files depend entirely on the flowio library.
hxk622Parse FCS files 2.0-3.1 into NumPy arrays and metadata.
OwnLabAIParse FCS files into NumPy arrays and read channel metadata.
Imad-OuteParse, analyze, and generate flow cytometry FCS files from NumPy arrays.
robotlearning123Parse FCS files and extract events and metadata as NumPy arrays.
