mrtrix3

Community

Plan safe diffusion tractography workflows.

AuthorMarvinCui
Version1.0.0
Installs0

System Documentation

What problem does it solve?

MRtrix3-specific questions in diffusion MRI can be hard to answer safely without the right context on supported commands, typical inputs/outputs, and quality-control expectations.

Core Features & Use Cases

  • Diffusion tractography planning: Guides what to use MRtrix3 for when addressing diffusion MRI tractography, FOD modeling, streamline filtering, and connectome generation at a documentation-and-routing level.
  • Command-level reference navigation: Points to high-value MRtrix3 docs (e.g., ACT/5TT tooling, connectome and tractography utilities) so an AI can ground suggestions in the right places.
  • Safe workflow outlines and cautions: Helps draft QC checks and expected outputs while explicitly warning against unintended heavy processing or data modification.

Quick Start

Use the mrtrix3 skill to draft a safe tractography plan and QC checklist for your diffusion MRI question, based on your provided data and goals.

Dependency Matrix

Required Modules

None required

Components

references

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: mrtrix3
Download link: https://github.com/MarvinCui/NeuroForge/archive/main.zip#mrtrix3

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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