Boran Cui
Community@marvincui · Beijing
Agent Skills by Boran Cui
Showing 18 vetted skills indexed across 1 GitHub repositories.
NeuroForge
Inspect and route psychology and neuroscience datasets into safe analysis plans.
snakemake
Plan reproducible Snakemake workflows with rule-based DAGs, inputs, outputs, logs, and configs.
pymc
Plan Bayesian model structures and MCMC diagnostics for PyMC workflows.
jspsych
Plan jsPsych experiment timelines and review exported trial data.
bids-specification
Validate neuroimaging and behavioral dataset organization against BIDS layout and naming conventions.
mne-python
Plan EEG and MEG preprocessing and analysis workflows in Python with MNE.
freesurfer
Plan FreeSurfer recon-all cortical workflows and route surface outputs.
nilearn
Plan fMRI GLM, masking, connectome, and ML workflows in Python with Nilearn guidance.
eeglab
Plan EEGLAB preprocessing and analysis workflows for EEG data.
afni
Plan AFNI-oriented MRI and fMRI command-line workflows with QC checks.
mrtrix3
Draft MRtrix3 diffusion MRI tractography plans with FOD modeling and QC checks.
dipy
Plan and validate DIPY diffusion MRI reconstruction and tractography workflows.
fmriprep
Interpret fMRIPrep derivatives, HTML reports, and confounds for downstream fMRI workflow planning.
nipype
Plan Nipype workflow orchestration for neuroimaging data processing.
psychopy
Plan PsychoPy Builder experiment routines, stimuli, responses, and logging.
nibabel
Plan NiBabel-based IO for NIfTI, GIFTI, CIFTI, and tractogram files.
qsiprep
Plan diffusion MRI preprocessing QC and downstream routing from QSIPrep derivatives.
pull-request
Standardize EEGLAB pull request descriptions and enforce pre-push MATLAB/Octave validation.