qsiprep

What problem does it solve?

It helps you reason safely about diffusion MRI preprocessing inputs and QSIPrep derivative outputs so you can plan quality control and next processing steps without guessing.

Core Features & Use Cases

• DWI preprocessing planning: clarify how QSIPrep handles diffusion preprocessing so you can interpret what to inspect before deeper analysis.
• QC-oriented guidance: identify the kinds of diffusion QC checks to plan for based on DWI metadata and QSIPrep derivative structure.
• Tool routing support: decide how to route preprocessed diffusion outputs onward to diffusion reconstruction/analysis workflows (e.g., MRtrix3 or DIPY) with appropriate cautions and documentation steps.
• Use Case: you have a BIDS diffusion dataset and QSIPrep outputs; you want a structured plan for verifying DWI gradient/metadata sufficiency and for deciding what to review before running downstream tractography.

Quick Start

Ask the qsiprep skill to help you plan what diffusion QC checks to perform on your QSIPrep DWI derivatives and what routing to use next for downstream reconstruction.