obo-foundry-ontologies
OfficialCross-species ontology insights for vets
AuthorOpenVet-Projects
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Integrates standardized veterinary ontologies to enable cross-species reasoning and consistent data annotation.
Core Features & Use Cases
- Ontology access for VBO, UBERON, HP/MP, CHEBI, and NCBITaxon to standardize terms and enable cross-dataset mapping.
- SPARQL-friendly querying and programmatic lookup to connect breeds, anatomy, phenotypes, chemicals, and taxonomy across species.
- Use cases include breed-disease linkage, anatomical standardization in EHRs, and translational pharmacology mappings between veterinary and human datasets.
- Example: Create a cross-species query to map canine kidney terms to human equivalents for toxicity assessment.
Quick Start
Load the VBO and UBERON ontologies to begin term lookups and cross-species equivalence mapping in your project.
Dependency Matrix
Required Modules
None requiredComponents
Standard package💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: obo-foundry-ontologies Download link: https://github.com/OpenVet-Projects/VetClaw/archive/main.zip#obo-foundry-ontologies Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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