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scientific-biothings-idmapping

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Cross-database ID mapping for bio entities.

Data & Analytics#genomics#batch-processing#data-integration#annotation#id-mapping#biothings
Authornahisaho
Version1.0.0
Installs0

System Documentation

What problem does it solve?

Automates cross-database ID mapping and unified annotation across BioThings MyGene.info, MyVariant.info, and MyChem.info for gene, variant, and chemical data.

Core Features & Use Cases

  • Cross-database ID mapping from Entrez to Ensembl, Symbol, UniProt, and more for genes.
  • Variant annotation retrieval (ClinVar, dbSNP, CADD) and chemical annotation aggregation.
  • Batch processing to consolidate multi-database metadata into unified results.

Quick Start

Run a batch mapping for a list of gene symbols to retrieve cross-database IDs and annotations.

Dependency Matrix

Required Modules

None required

Components

Standard package

💻 Claude Code Installation

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Please help me install this Skill:
Name: scientific-biothings-idmapping
Download link: https://github.com/nahisaho/satori/archive/main.zip#scientific-biothings-idmapping

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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