obsidian-literature-workflow

Automate literature note ingestion and knowledge mapping in Obsidian projects.

13|1|Updated Apr 14, 2026
One-click install
npx skills add https://github.com/debug-zhuweijian/ai-research-toolkit --skill obsidian-literature-workflow-debug-zhuweijian
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: obsidian-literature-workflow
Source: https://github.com/debug-zhuweijian/ai-research-toolkit/tree/main/modules/05-knowledge/skills/obsidian-literature-workflow
Command: npx skills add https://github.com/debug-zhuweijian/ai-research-toolkit --skill obsidian-literature-workflow-debug-zhuweijian

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill includes scripts (resource) and references (resource) components.

What problem does it solve?

Handle the literature sub-workflow inside the filesystem-first Obsidian project knowledge base.

Core Features & Use Cases

  • Supports bound Obsidian project memory and Zotero-assisted ingestion into Papers/ and Knowledge/Notes
  • Generates literature overviews and knowledge graphs to organize research
  • Updates daily notes and project memory with changes and synthesis results

Quick Start

Open the bound Obsidian vault and run the Obsidian Literature Workflow to bootstrap and generate literature notes and canvas maps.

Frequently Asked Questions about obsidian-literature-workflow

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I import Zotero literature notes into an Obsidian vault?

The workflow ingests Zotero metadata to generate literature notes within a bound Obsidian project. It automatically organizes the ingested papers into Papers/ and Knowledge/ directories using a filesystem-first approach.

Can I generate a knowledge map for academic research papers in Obsidian?

Yes, you can generate a knowledge map for academic research papers in Obsidian. The workflow synthesizes literature into canvas maps by utilizing frontmatter fields like subfield and canvas_visibility to structure the visual relationships.

Does the Obsidian literature workflow require a specific project structure?

Yes, the Obsidian literature workflow requires a filesystem-first project structure bound to a memory registry at .claude/project-memory/registry.yaml. It expects literature notes to be organized under Papers/ and Knowledge/ directories with specific frontmatter fields.

What is the best way to synthesize academic research notes inside Obsidian?

The best way to synthesize academic research notes is to use an automated workflow that ingests Zotero metadata and updates daily notes with the synthesis results. This leverages a bound project memory registry to maintain a cohesive knowledge base.

How do I manage literature notes using a filesystem-first Obsidian project?

You manage literature notes by storing papers in Obsidian and utilizing Zotero metadata for ingestion. The workflow automatically updates project memory and daily notes based on changes and synthesis results within the bound project.

Why are my literature notes not appearing in the knowledge graph canvas?

Literature notes may not appear in the knowledge graph canvas if the frontmatter field canvas_visibility is not configured correctly. The workflow relies on specific frontmatter fields like subfield and canvas_visibility to generate and organize canvas maps.