opentargets-database

Query the Open Targets Platform GraphQL API for target-disease associations and drug data.

1|Updated Jan 14, 2026
One-click install
npx skills add https://github.com/Sologa/codex-pipeline --skill opentargets-database-sologa
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: opentargets-database
Source: https://github.com/Sologa/codex-pipeline/tree/main/.codex/skills/opentargets-database
Command: npx skills add https://github.com/Sologa/codex-pipeline --skill opentargets-database-sologa

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill requires requests, and includes scripts (resource) and references (resource) components.

What problem does it solve?

This Skill helps researchers and drug developers identify and prioritize potential therapeutic targets by querying the comprehensive Open Targets Platform for target-disease associations, genetic evidence, known drugs, and safety data.

Core Features & Use Cases

  • Target Discovery: Find potential drug targets for a given disease.
  • Target Validation: Assess a gene's druggability, safety, and genetic relevance.
  • Drug Repurposing: Identify existing drugs that could be used for new indications.
  • Use Case: You want to find potential targets for Alzheimer's disease. Use this Skill to search for genes associated with Alzheimer's, review their genetic evidence, tractability, and safety profiles.

Quick Start

Search for targets associated with Alzheimer's disease and list the top 5.

Frequently Asked Questions about opentargets-database

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I identify therapeutic targets for a specific disease?

To identify therapeutic targets for a specific disease, query the Open Targets Platform GraphQL API to retrieve target-disease associations and genetic evidence. This facilitates therapeutic target identification and prioritization in drug discovery.

Can I assess drug safety and druggability for target validation?

Yes, you can assess drug safety and druggability for target validation by querying integrated biological and clinical data. The API retrieves safety profiles and tractability information to validate potential drug targets.

How do I find existing drugs for drug repurposing opportunities?

Find existing drugs for drug repurposing by querying the Open Targets Platform for drug information and disease associations. This retrieves known drugs that could potentially be used for new indications.

Does this tool require the requests library to query the GraphQL API?

Yes, querying the GraphQL API requires the requests library. This dependency enables programmatic access to retrieve and analyze integrated genetic evidence and pharmacology data.

What is the best way to search for genetic evidence associated with Alzheimer's disease?

The best way to search for genetic evidence associated with Alzheimer's disease is using the Open Targets Platform API. Search for associated genes, then review their genetic evidence, tractability, and safety profiles.

Are there limitations to retrieving disease association data through the GraphQL API?

Limitations of retrieving disease association data through the GraphQL API include dependency on the Open Targets Platform's integrated data scope. Target identification and validation rely on the available genetic evidence, drug information, and safety profiles.