Inventory, validate BIDS structure, and convert neuroimaging data to NIfTI.
npx skills add https://github.com/stanislavjiricek/neuroflow --skill phase-data
Please help me install this Agent Skill. Skill: phase-data Source: https://github.com/stanislavjiricek/neuroflow/tree/main/skills/phase-data Command: npx skills add https://github.com/stanislavjiricek/neuroflow --skill phase-data
This Skill automates the process of locating, validating, and converting neuroimaging data into a standardized format, ensuring readiness for preprocessing.
Initiate the data phase to inventory, validate, and convert neuroimaging datasets.
High-intent search queries and answers about installing and using this skill.
BIDS validation checks whether your neuroimaging datasets adhere to the Brain Imaging Data Structure standard. This Skill inventories raw MRI scans, verifies their BIDS compliance, and notes any structural deviations found during the validation sequence.
Converting raw MRI scans to NIfTI format requires running conversion scripts after validating the data structure. This Skill guides you through a three-step sequence—inventory, validate, and convert—to prepare neuroimaging data for downstream preprocessing and analysis.
Neuroimaging data intake involves locating raw datasets, validating their BIDS structure, and running conversion scripts. This Skill automates that process by identifying available datasets and their paths, checking BIDS adherence, and summarizing findings for preprocessing readiness.
BIDS validation does not require pre-converted data. This Skill begins by inventorying available raw neuroimaging datasets and their paths, then validates their structural compliance before executing any format conversion scripts.
Preprocessing failures often stem from structural deviations in the BIDS compliance of your neuroimaging data. This Skill identifies available datasets, validates their BIDS structure, and notes structural deviations to ensure data is prepared correctly for preprocessing.
Automating data inventory and format conversion for neuroimaging datasets is possible through this Skill. It locates raw data paths, validates BIDS compliance, and runs conversion scripts to produce analysis-ready output for preprocessing pipelines.
xjtulycConvert raw EEG/MEG/fMRI data into BIDS 1.8 directory layouts with metadata.
MarvinCuiPlan fMRI GLM, masking, connectome, and ML workflows in Python with Nilearn guidance.
Lord1EgyptOrganize and validate neuroscience data according to the BIDS specification.
CUHK-AIM-GroupGenerate and execute fMRIPrep preprocessing plans for BIDS datasets.
