phylogetics
CommunityBuild and visualize evolutionary trees.
Authormkurman
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Reconstruct evolutionary relationships and analyze sequence data by building and interpreting phylogenetic trees.
Core Features & Use Cases
- MAFFT for multiple sequence alignment; IQ-TREE 2 for maximum likelihood tree inference; FastTree for large datasets; ETE3/FigTree for visualization.
- Applicable to microbial genomics, viral phylodynamics, protein family analyses, and molecular clock studies.
- Use cases include tracing outbreak lineages, comparing gene families, and dating divergence events.
Quick Start
Run the phylogenetic pipeline on your unaligned sequences to generate a rooted, visualizable tree.
Dependency Matrix
Required Modules
mafftiqtree2
Components
scriptsreferences
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: phylogetics Download link: https://github.com/mkurman/tamux/archive/main.zip#phylogetics Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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