Provide structured access to pipeio pipeline metadata and authoring workflows.
npx skills add https://github.com/arashshahidi1997/projio --skill pipeio-guide
Please help me install this Agent Skill. Skill: pipeio-guide Source: https://github.com/arashshahidi1997/projio/tree/main/docs/prompts/skills/pipeio-guide Command: npx skills add https://github.com/arashshahidi1997/projio --skill pipeio-guide
Pipeio-guide provides a structured reference for the pipeio ontology, outlining flow and mod hierarchy, directory layout, configuration conventions, notebook workspaces, mod docs, and MCP tools to streamline pipeline authoring and discovery.
Initialize a workspace for a new flow and start exploring mods with MCP tools.
High-intent search queries and answers about installing and using this skill.
You organize pipeline metadata using the pipeio ontology, which structures computational flows, mods, and rules hierarchically to support MCP-based discovery and safe authoring across notebook workspaces.
Organize mods and rules by following the pipeio ontology directory layout and configuration conventions, separating theory, spec, and delta documentation per mod to improve maintainability and MCP discovery.
Yes, MCP tooling supports computational flows by enumerating server tools for flow inspection, editing, and validation, enabling teams to audit and publish Snakemake pipelines efficiently.
To start authoring a computational flow workspace, initialize a new workspace and explore mods using MCP tools, ensuring your SKILL.md frontmatter includes the required name and description fields for proper validation.
Maintaining pipeline mods requires three documentation facets: theory, spec, and delta docs per mod, which streamline pipeline authoring and ensure computational flows remain discoverable and maintainable.
jungaiCreate and update Codex skills with standard SKILL.md frontmatter.
mandubianDiscover, inspect, and execute CCOS MCP tools within a governance-enabled runtime.
pradyumnasagarManage computational pipelines with Snakemake rule-based dependency resolution.
TimMoyenceGuide users to GitNexus MCP tools, resources, and knowledge graph schema.
