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pubmed-screening

Screen MEDLINE exports against PICO, CoCoPop, and SPIDER frameworks.

Updated Nov 16, 2025
Search Tags:#screening#AI-assisted#pubmed#systematic-review#MeSH#MEDLINE
One-click install
npx skills add https://github.com/shaitamam-80/shaitamamMedAIHub --skill pubmed-screening
Or copy as Structured Prompt for Agent▼
Please help me install this Agent Skill.
Skill: pubmed-screening
Source: https://github.com/shaitamam-80/shaitamamMedAIHub/tree/main/backend/app/core/skills/pubmed-screening
Command: npx skills add https://github.com/shaitamam-80/shaitamamMedAIHub --skill pubmed-screening

SYSTEM DOCUMENTATION & REQUIREMENTS

What problem does it solve?

PubMed Mapping & Screening helps researchers perform structured, transparent abstract screening of PubMed results to speed up evidence synthesis, reducing manual workload during the screening phase.

Core Features & Use Cases

  • Interactive, framework-aware screening against PICO, CoCoPop, PFO, SPIDER, SPICE, and other frameworks.
  • Automated extraction and alignment of MeSH terms with inclusion/exclusion criteria from MEDLINE exports.
  • Output formats include a screening table and CSV for direct import into review workflows; suitable for systematic reviews, scoping reviews, and rapid clinical answers.
  • Use Case: after exporting PubMed MEDLINE, load results to generate a structured decision list and MeSH-based filters for screening.

Quick Start

Load an MEDLINE-formatted file or connect to a PubMed search, then start screening against your structured question.

Frequently Asked Questions about pubmed-screening

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I screen PubMed MEDLINE results for a systematic review?▼

Screen PubMed MEDLINE results by loading a MEDLINE-formatted export into the tool, which applies framework-based criteria like PICO or SPIDER to filter abstracts and outputs a structured screening table with CSV for downstream review.

Can I use MeSH terms to filter abstracts during evidence synthesis?▼

Yes, MeSH terms are automatically extracted and aligned with your inclusion and exclusion criteria from MEDLINE exports to generate structured, MeSH-based filters for screening abstracts during evidence synthesis.

What research question frameworks are supported for abstract screening?▼

Abstract screening supports PICO, CoCoPop, PFO, SPIDER, and SPICE frameworks, allowing you to map MEDLINE-formatted results against your specific structured research question criteria.

How do I format PubMed search results for automated screening?▼

Format PubMed search results as a MEDLINE-formatted file export. Loading this file allows the screening tool to parse entries and apply automated filtering against your defined research question.

Does this screening tool work for scoping reviews and rapid clinical answers?▼

Yes, this screening tool is suitable for systematic reviews, scoping reviews, and rapid clinical answers, generating a structured decision list and CSV output to speed up evidence synthesis across various review types.

What output formats does the PubMed screening process generate?▼

The PubMed screening process generates a screening table and a CSV file format, designed for direct import into downstream review workflows to help researchers manage abstract eligibility decisions.

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