pubmed-search

Search PubMed for scientific literature using BioPython's Entrez module.

1|Updated Mar 12, 2026
One-click install
npx skills add https://github.com/yf8578/clawomics --skill pubmed-search-yf8578
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: pubmed-search
Source: https://github.com/yf8578/clawomics/tree/main/skills/pubmed-search
Command: npx skills add https://github.com/yf8578/clawomics --skill pubmed-search-yf8578

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill requires biopython, and includes scripts (resource) and references (resource) components.

What problem does it solve?

This Skill helps users find relevant scientific literature and research papers on specific topics, saving them time and effort in literature reviews.

Core Features & Use Cases

  • Literature Search: Find papers based on keywords, titles, authors, and publication dates.
  • Information Retrieval: Extract key details like title, authors, journal, year, and abstract.
  • Use Case: A researcher needs to find recent studies on CRISPR delivery methods. This Skill can query PubMed and provide a list of relevant publications with summaries.

Quick Start

Use the pubmed-search skill to find papers about CRISPR delivery methods.

Frequently Asked Questions about pubmed-search

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I search PubMed for biomedical literature using Python?

To search PubMed for biomedical literature, you can use the BioPython Entrez module to query the NCBI API and retrieve publication data. This approach allows you to find scientific papers based on specific keywords, authors, and publication dates.

What details can I retrieve from a PubMed literature search?

A PubMed literature search can retrieve key publication details including the paper title, author list, journal name, publication year, and abstract. This information is extracted directly from the NCBI Entrez database records.

Do I need BioPython to query the NCBI Entrez API for research papers?

Yes, you need BioPython to query the NCBI Entrez API for research papers using this specific Skill. The Skill relies on the BioPython Entrez module to interface with NCBI and retrieve scientific publication data.

How do I find recent scientific publications on a specific topic like CRISPR delivery methods?

To find recent scientific publications on topics like CRISPR delivery methods, use a PubMed search query filtered by keywords and publication dates. The Skill queries the database and returns a list of relevant publications with summaries.

Can I search for scientific papers by author and publication date on PubMed?

Yes, you can search for scientific papers by author and publication date on PubMed. The Skill supports querying the NCBI Entrez database using these specific criteria to find relevant biomedical literature.