Anonymize PHI in DICOM files while preserving pixel data and metadata.
npx skills add https://github.com/rubensliv/k-dense-ai --skill pydicom-rubensliv
Please help me install this Agent Skill. Skill: pydicom Source: https://github.com/rubensliv/k-dense-ai/tree/main/scientific-skills/pydicom Command: npx skills add https://github.com/rubensliv/k-dense-ai --skill pydicom-rubensliv
PHI-rich DICOM datasets often need safe sharing and preprocessing. This skill anonymizes patient identifiers while preserving pixel data and essential metadata for research, clinical workflows, and data analysis.
Start by running the skill on input.dcm to anonymize PHI and generate an anonymized output and a pixel data preview image.
High-intent search queries and answers about installing and using this skill.
Anonymize DICOM files by stripping PHI identifiers from metadata tags while explicitly retaining the raw pixel data arrays, ensuring datasets remain intact for clinical imaging research and safe sharing.
Yes, you can convert DICOM pixel data to common image formats like PNG or JPEG by utilizing Python imaging libraries to extract arrays and generate preview images.
Yes, pydicom supports reading, writing, and modifying multi-frame DICOM series, enabling basic visualization and metadata extraction across complex clinical imaging datasets.
Handle DICOM transfer syntaxes and basic compression or decompression workflows in Python by utilizing dedicated libraries that parse file headers and manage pixel data encoding.
You need numpy and Pillow as optional dependencies to support pixel data processing and image export, while the core DICOM reading and anonymization relies on pydicom.
felixboehmRead, write, and manipulate DICOM medical imaging files with pydicom.
aurabxConvert DICOM medical images to NIfTI, PNG, JPEG, and HDF5 formats.
dralkhRead, write, anonymize, and convert DICOM medical imaging files with pydicom and NumPy/Pillow support.
DrugClawInspect DICOM metadata, analyze biosignals with NeuroKit2, and profile clinical cohort tables.
