Launch a PyMOL session via pymol-agent-bridge for molecular visualization and image export.
npx skills add https://github.com/ANaka/claudemol --skill pymol
Please help me install this Agent Skill. Skill: pymol Source: https://github.com/ANaka/claudemol/tree/main/claude-plugin/skills/pymol Command: npx skills add https://github.com/ANaka/claudemol --skill pymol
Establish a smooth, reliable PyMOL session workflow from Claude, enabling quick visualization and interactive manipulation of molecular structures without manual setup.
Run /pymol-setup to install and configure the bridge, then ask Claude to launch and connect to a PyMOL session via the pymol-agent-bridge.
High-intent search queries and answers about installing and using this skill.
You can control PyMOL visualization from Claude by launching the pymol-agent-bridge to establish a socket connection for manipulating molecular structures, selections, and representations.
To automate PyMOL sessions, you need to run the initial setup to install the pymol-agent-bridge and configure your PyMOL environment, ensuring a stable socket connection for structure visualization.
Yes, you can generate publication-quality figures by instructing Claude to apply specific representations and export high-quality images of your molecular structures directly through the active PyMOL session.
Claude handles binding site visualization by sending commands through the pymol-agent-bridge to create specific selections and representations, allowing you to visualize protein-ligand interactions without manual setup.
Session disconnections during structure manipulation often occur if the pymol-agent-bridge is not properly configured or the socket connection is unstable, requiring you to verify your environment setup and reconnect.
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