scientific-disease-research

Integrates GWAS Catalog, Orphanet, OMIM, HPO, DisGeNET for disease-genetic analysis.

3|1|Updated Feb 11, 2026
One-click install
npx skills add https://github.com/nahisaho/satori --skill scientific-disease-research
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: scientific-disease-research
Source: https://github.com/nahisaho/satori/tree/main/src/.github/skills/scientific-disease-research
Command: npx skills add https://github.com/nahisaho/satori --skill scientific-disease-research

SYSTEM DOCUMENTATION & REQUIREMENTS

What problem does it solve?

Disease-genetic analysis often requires integrating multiple data sources (GWAS Catalog, Orphanet, OMIM, HPO, DisGeNET) to identify gene-disease associations and support diagnostic reasoning.

Core Features & Use Cases

  • Integrated disease-genetic analysis across GWAS catalogs, rare-disease databases, and phenotype ontologies to prioritize candidate genes and diagnoses.
  • Use cases include interpreting GWAS results, rare disease diagnosis support, phenotype-genotype mapping, and epidemiological characterization.
  • Example: map patient HPO terms to candidate diseases and then extract top gene-disease associations for reporting.

Quick Start

Provide a list of HPO terms and let the skill rank candidate diseases and implicated genes.

Frequently Asked Questions about scientific-disease-research

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I map patient HPO terms to candidate diseases for rare disease diagnosis?

To map patient HPO terms to candidate diseases, you provide a list of HPO terms to rank potential diagnoses and implicated genes. The skill integrates Orphanet, OMIM, and DisGeNET data to prioritize diagnostic candidates based on phenotype characterization.

What's the best way to integrate GWAS results with disease databases for gene-disease mapping?

Integrating GWAS results with disease databases is achieved by combining GWAS Catalog data with DisGeNET scoring and Orphanet lookups. This approach supports gene-disease mapping and epidemiological characterization to generate an end-to-end diagnostic report.

Can I use DisGeNET scoring to prioritize candidate genes across multiple data sources?

Yes, you can use DisGeNET scoring to prioritize candidate genes across multiple data sources. The skill implements DisGeNET scoring alongside HPO-based phenotyping and OMIM lookups to support diagnostic candidate prioritization for genetic analysis.

Does this approach support phenotype characterization using HPO and OMIM data?

Yes, this approach supports phenotype characterization using HPO and OMIM data. It implements HPO-based phenotyping to characterize patient symptoms and integrates OMIM databases to support comprehensive phenotype-genotype mapping for disease research.

When do I need to cross-reference Orphanet and GWAS Catalog for genetic analysis?

You need to cross-reference Orphanet and GWAS Catalog when interpreting GWAS results for rare disease diagnosis support. This integration enables epidemiological characterization and gene-disease mapping across diverse data sources for diagnostic reasoning.