scientific-marine-ecology

Integrate OBIS, WoRMS, GBIF, and FishBase for marine biodiversity analyses.

3|1|Updated Feb 11, 2026
One-click install
npx skills add https://github.com/nahisaho/satori --skill scientific-marine-ecology
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: scientific-marine-ecology
Source: https://github.com/nahisaho/satori/tree/main/src/.github/skills/scientific-marine-ecology
Command: npx skills add https://github.com/nahisaho/satori --skill scientific-marine-ecology

SYSTEM DOCUMENTATION & REQUIREMENTS

What problem does it solve?

Integrates OBIS, WoRMS, GBIF, and FishBase to enable comprehensive marine biodiversity analysis by unifying distribution data, taxonomy validation, and ecological context.

Core Features & Use Cases

  • OBIS-based occurrence retrieval and distribution analysis for marine taxa.
  • WoRMS taxonomic validation and hierarchical classification retrieval.
  • GBIF species matching and occurrence enrichment to broaden datasets.
  • FishBase-derived ecological traits to contextualize species information.
  • End-to-end pipelines for regional biodiversity assessments and conservation planning.

Quick Start

Run the marine ecology pipeline to fetch taxonomic validation, distribution data, and biodiversity metrics for a given taxon in a defined region.

Frequently Asked Questions about scientific-marine-ecology

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I integrate OBIS and GBIF occurrence data for marine biodiversity analysis?

To integrate OBIS and GBIF occurrence data for marine biodiversity analysis, you can use a pipeline that queries both external database endpoints via Python functions, unifying distribution datasets for comprehensive taxa mapping.

How does WoRMS taxonomic validation work with marine species occurrence records?

WoRMS taxonomic validation works by retrieving hierarchical classification and validating marine taxa names, ensuring accurate species matching before cross-referencing occurrence data with external databases.

Can I use FishBase to add ecological traits and context to marine distribution data?

Yes, you can use FishBase to retrieve ecological traits that contextualize marine species information, combining these traits with validated distribution data to support regional biodiversity assessments.

What is the best way to map marine taxa distribution across regional seas using multiple databases?

The best way to map marine taxa distribution across regional seas is orchestrating cross-database queries between OBIS, GBIF, and WoRMS, requiring network access to unify occurrence retrieval and taxonomic validation.

Do I need network access to external database endpoints for marine taxonomy validation and data integration?

Yes, network access to external database endpoints is required, because the marine biodiversity data integration process orchestrates live cross-database queries to retrieve occurrence records and validate taxonomy.

How to build an end-to-end pipeline for regional marine biodiversity assessment and conservation planning?

Build a regional marine biodiversity assessment pipeline by sequentially executing Python functions for WoRMS validation, OBIS occurrence retrieval, GBIF enrichment, and FishBase trait contextualization to generate unified ecological datasets.