sequence-slicing
CommunityEfficiently slice and subset sequences and SeqRecords.
Education & Research#bioinformatics#sequence manipulation#GenBank features#sequence slicing#SeqRecord
Authorpradyumnasagar
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This Skill simplifies the process of slicing, subsetting, and extracting regions from sequences and SeqRecords, streamlining bioinformatics workflows.
Core Features & Use Cases
- Sequence Slicing: Extract specific regions from sequences.
- SeqRecord Subsetting: Select and manipulate SeqRecord objects.
- Feature Extraction: Extract features from GenBank records.
- Use Case: Quickly isolate a gene or CDS from a chromosome sequence for further analysis.
Quick Start
Use the sequence-slicing skill to extract the CDS region from the sequence file 'chr1.fasta'.
Dependency Matrix
Required Modules
biopython
Components
scripts
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: sequence-slicing Download link: https://github.com/pradyumnasagar/open-research-skills/archive/main.zip#sequence-slicing Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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