spatial-tutorials
OfficialMaster spatial analysis workflows for multi-modal data.
Authoromicverse
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This Skill provides comprehensive guidance for executing spatial transcriptomics and related analyses, helping users efficiently perform preprocessing, deconvolution, integration, and downstream tasks.
Core Features & Use Cases
- Workflow Guidance: Step-by-step instructions to process spatial data, including cropping, rotating, segmentation, and normalization.
- Advanced Analysis: Techniques for cell deconvolution, tissue integration, trajectory inference, and cell communication modeling.
- Use Case: A researcher aims to preprocess Visium data, deconvolve cell types, and analyze spatial communication in tumor microenvironments—this Skill consolidates all steps.
Quick Start
Provide detailed instructions and code snippets for spatial data processing, deconvolution, and downstream analysis workflows.
Dependency Matrix
Required Modules
None requiredComponents
references
đź’» Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: spatial-tutorials Download link: https://github.com/omicverse/omicverse/archive/main.zip#spatial-tutorials Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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