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Imad-Oute
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tooluniverse

Discover and execute scientific tools via natural language and API searches.

Updated May 10, 2026
Search Tags:#workflow#research#bioinformatics#science#tools#cheminformatics#structural biology
One-click install
npx skills add https://github.com/Imad-Oute/ResearchForge --skill tooluniverse-imad-oute
Or copy as Structured Prompt for Agent▼
Please help me install this Agent Skill.
Skill: tooluniverse
Source: https://github.com/Imad-Oute/ResearchForge/tree/main/OpenSource-Projects/claude-scientific-skills/scientific-skills/tooluniverse
Command: npx skills add https://github.com/Imad-Oute/ResearchForge --skill tooluniverse-imad-oute

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill includes references (resource) and scripts (resource) components.

What problem does it solve?

This Skill simplifies access to a vast ecosystem of over 600 scientific research tools, enabling users to discover, integrate, and automate complex workflows across multiple domains.

Core Features & Use Cases

  • Tool Discovery: Find relevant computational biology, cheminformatics, genomics, and structural biology tools using semantic or keyword searches.
  • Workflow Automation: Compose multi-step research pipelines, such as drug discovery or genomics analysis, by chaining tools.
  • Data Access & Analysis: Access scientific databases and execute analysis routines with minimized manual effort, supporting tasks like structure prediction, pathway enrichment, and variant annotation.
  • Use Case: For example, a researcher can identify targets using OpenTargets, obtain protein structures via AlphaFold, and screen chemical compounds for potential drug candidates automatically.

Quick Start

Invoke the tooluniverse API to load the extensive collection of scientific tools and run a search query such as finding tools for gene expression analysis, then execute selected tools with parameters.

Frequently Asked Questions about tooluniverse

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I find and execute bioinformatics tools for genomic analysis?▼

You can discover and execute bioinformatics tools for genomic analysis by querying a database of over 600 scientific research tools using natural language or keyword searches, then running selected tools with specific parameters via API automation.

What is the best way to automate a drug discovery workflow across multiple scientific databases?▼

Automating a drug discovery workflow involves chaining multiple scientific tools together, such as identifying targets with OpenTargets, fetching protein structures via AlphaFold, and screening chemical compounds automatically through API-based execution.

Does tooluniverse support structural biology and cheminformatics research pipelines?▼

Yes, it supports structural biology and cheminformatics research pipelines by providing semantic and keyword discovery of computational tools, enabling multi-step data analysis workflows like structure prediction and pathway enrichment.

How do I integrate scientific research tools with an LLM for automated data access?▼

You can integrate scientific research tools with an LLM by utilizing an API that facilitates natural language queries and automated execution, ensuring seamless interaction between the language model and complex scientific databases.

Do I need a GPU to perform semantic searches for scientific research tools?▼

A GPU is optional but recommended for embedding-based semantic searches to efficiently discover relevant computational biology and cheminformatics tools, while standard SDK setup is required for basic API access and execution.

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