uniprot-database

You retrieve protein sequences and annotations in bulk by leveraging the UniProt REST API streaming feature. This approach enables high-throughput fetching of FASTA sequences and selectable annotation fields for bioinformatics pipelines and data curation tasks.

Yes, you can query the UniProt REST API to search proteins by name, gene, accession, or organism. The skill implements query construction with selectable fields to filter and retrieve specific protein discovery results accurately.

Yes, this UniProt API client implements basic error handling and rate limiting to manage large batch requests. It orchestrates streaming across formats to ensure stable data retrieval during high-throughput analyses or extensive pipeline processing.

The best way to stream large UniProt datasets is using this skill's streaming orchestration across formats like FASTA. It handles query construction and batch retrieval to efficiently process high-throughput protein data within bioinformatics pipelines.