Brent McPherson
Community@bcmcpher · Montreal, QC
Agent Skills by Brent McPherson
Showing 45 vetted skills indexed across 1 GitHub repositories.
bcmcpherpydfc-demo-guide
Install pydfc and run dFC demo workflows with sample data.
bcmcpherboutiques
Generate Boutiques schema 0.5 JSON descriptors from CLI help output.
bcmcpheranalysis-plan
Structure repetitive data analyses with a five-phase orchestration framework.
bcmcpheranalysis-refactor
Refactor sequential analysis scripts into a five-layer modular architecture with run_one orchestration.
bcmcpherbids
Validate and organize BIDS-compliant neuroimaging dataset structures.
bcmcphernipoppy-cli
Manage Nipoppy neuroimaging dataset workflows from initialization to extraction.
bcmcphergit-workflow
Coordinate Git workflows with commits, branching, rebasing, and parallel agent worktrees.
bcmcpherdatalad-status
Inspect file changes and dataset state in a DataLad repository.
bcmcpherdatalad-init
Initialize DataLad datasets with YODA layout and pre-flight validations.
bcmcpherdatalad-fsck
Verify annexed file content integrity in DataLad datasets using git annex fsck.
bcmcpherdatalad-addurls
Bulk-populate a DataLad dataset from CSV, TSV, or JSON URL manifests.
bcmcpherdatalad-configuration
Read and write DataLad/git configuration at dataset, local, or global scopes.
bcmcpherdatalad-get
Fetch annexed content and initialize subdatasets in DataLad datasets.
bcmcpherdatalad-diff
Compare file-level state differences in DataLad datasets across revisions.
bcmcpherdatalad-update
Fetch sibling changes and merge them into DataLad datasets recursively.
bcmcpherdatalad-siblings
Configure and manage DataLad dataset siblings and their remotes.
bcmcpherdatalad-container-run
Automate container provenance capture for DataLad runs.
bcmcpherdatalad-export
Export DataLad datasets to local TAR/ZIP archives or Figshare publications.
bcmcpherdatalad-log
Trace DataLad run provenance by listing and inspecting recorded runs.
bcmcpherdatalad-subdatasets
Locate and report present or absent subdatasets within a DataLad dataset.
bcmcpherdatalad-push
Push saved DataLad dataset state to a configured remote.
bcmcpherdatalad-credentials
Manage DataLad credentials for remote storage authentication via set, get, and remove operations.
bcmcpherdatalad-clone
Clone DataLad datasets from URLs or local paths into standalone or subdataset contexts.
bcmcpherdatalad-save
Automate saving changes in DataLad datasets with datalad save.