alterlab-brenda
CommunityQuery and analyze enzyme data via BRENDA API
AuthorAlterLab-IEU
Version1.0.0
Installs0
System Documentation
What problem does it solve?
BRENDA is a comprehensive enzyme information resource; this Skill provides programmatic access to Km values, reaction data, and organism-specific information via the SOAP API to accelerate biochemical research, data integration, and pathway design.
Core Features & Use Cases
- Km retrieval across organisms, substrates, and EC numbers to enable cross-species comparisons.
- Extraction of reaction equations, substrates/products, and organism context for modeling and literature curation.
- Organism-level data synthesis and environmental parameter summaries to inform experimental planning and metabolic engineering.
Quick Start
Query Km values for EC 1.1.1.1 for Escherichia coli and fetch the related reaction data.
Dependency Matrix
Required Modules
zeeprequestspandasnumpymatplotlibseabornnetworkxbrenda_client
Components
scriptsreferences
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: alterlab-brenda Download link: https://github.com/AlterLab-IEU/AlterLab-Academic-Skills/archive/main.zip#alterlab-brenda Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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