clinpgx-database

Name: clinpgx-database
Availability: InStock
Author: jiaxiaojun

Query ClinPGx pharmacogenomics data for gene-drug interactions and CPIC guidelines.

75|7|Updated Feb 14, 2026

Search Tags:#api #clinical-annotations #pharmacogenomics #gene-drug #cpic #allele

Ready to run

npx skills add https://github.com/jiaxiaojunQAQ/SkillJect --skill clinpgx-database-jiaxiaojunqaq

💬 Prompt for ChatGPT / Claude Chat▼

Please help me install this Agent Skill.
Skill: clinpgx-database
Source: https://github.com/jiaxiaojunQAQ/SkillJect/tree/main/data/skills_sample/clinpgx-database
Command: npx skills add https://github.com/jiaxiaojunQAQ/SkillJect --skill clinpgx-database-jiaxiaojunqaq

SYSTEM DOCUMENTATION & REQUIREMENTS

What problem does it solve?

ClinPGx pharmacogenomics data and guidelines are scattered across multiple sources; this skill centralizes querying gene–drug interactions, CPIC guidelines, and allele information to support evidence-based clinical decision-making.

Core Features & Use Cases

Gene and Drug Queries: Retrieve pharmacogene and medication details to support pharmacogenomic workflows.
CPIC Guidelines, Alleles & Annotations: Access CPIC guidelines, allele functions, and curated clinical annotations for decision support.
Drug Labels & Pathways: Explore regulatory labels and metabolic pathways to inform dosing and safety considerations.
Use Case: A clinician queries CYP2C19-clopidogrel CPIC guidance to tailor antiplatelet therapy for a patient.

Quick Start

Query the ClinPGx API to fetch CPIC guidelines for a gene-drug pair and save the results to a JSON file.

Frequently Asked Questions about clinpgx-database

High-intent search queries and answers about installing and using this skill.

FAQPage Schema

How do I query CPIC guidelines for gene-drug interactions?▼

You can query CPIC guidelines by applying this skill to retrieve gene-drug interaction data. It fetches clinical annotations and guideline details via a safe API access helper with rate limiting and caching.

What is pharmacogenomics clinical annotation data and how is it accessed?▼

Pharmacogenomics clinical annotation data provides evidence-based gene-drug interaction details, CPIC guidelines, and allele functions. This skill centralizes and accesses this scattered data through a safe API with caching to support clinical decision-making.

Can I retrieve allele functions and drug metabolic pathways for dosing decisions?▼

Yes, you can retrieve allele functions and drug metabolic pathways to inform dosing and safety considerations. The skill queries the ClinPGx API to access regulatory drug labels, pathway information, and curated clinical annotations.

Does the pharmacogenomics data API helper require external dependencies?▼

No, the pharmacogenomics data API helper requires no external dependencies. It implements a standalone lightweight Python script with built-in rate limiting and caching to safely access the ClinPGx API.

What's the best way to centralize scattered CPIC pharmacogenomics guidelines?▼

The best way to centralize scattered CPIC pharmacogenomics guidelines is using this skill's API querying capability. It consolidates gene-drug interactions, allele information, and clinical annotations into a unified JSON output for decision support.

Why does querying pharmacogenomics data need rate limiting and caching?▼

Querying pharmacogenomics data needs rate limiting and caching to ensure safe API access and prevent request failures. The skill implements these mechanisms to efficiently retrieve genes, drugs, variants, and pathway information without exceeding API thresholds.