docking-rescoring

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Advanced ML-based protein-ligand docking and rescoring

Authorpradyumnasagar
Version1.0.0
Installs0

System Documentation

What problem does it solve?

This Skill provides advanced protein-ligand docking and rescoring capabilities using modern machine learning models, addressing the complexities of molecular interaction prediction.

Core Features & Use Cases

  • ML Docking and Rescoring: Combines various machine learning models for pose prediction and scoring.
  • Hybrid Workflows: Supports hybrid workflows that integrate classical and machine learning approaches.
  • Use Case: When you need to predict the binding affinity of a protein-ligand complex and ensure the pose is physically plausible, this skill can be used to perform the task efficiently.

Quick Start

Run the docking-rescoring skill with the protein and ligand structures to obtain the optimized pose and binding affinity.

Dependency Matrix

Required Modules

diffdockboltzchaideepmindequibindtankbindneuralplexergninaposebusters

Components

scriptsreferencesassets

💻 Claude Code Installation

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Please help me install this Skill:
Name: docking-rescoring
Download link: https://github.com/pradyumnasagar/open-research-skills/archive/main.zip#docking-rescoring

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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