docking-rescoring
CommunityAdvanced ML-based protein-ligand docking and rescoring
Authorpradyumnasagar
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This Skill provides advanced protein-ligand docking and rescoring capabilities using modern machine learning models, addressing the complexities of molecular interaction prediction.
Core Features & Use Cases
- ML Docking and Rescoring: Combines various machine learning models for pose prediction and scoring.
- Hybrid Workflows: Supports hybrid workflows that integrate classical and machine learning approaches.
- Use Case: When you need to predict the binding affinity of a protein-ligand complex and ensure the pose is physically plausible, this skill can be used to perform the task efficiently.
Quick Start
Run the docking-rescoring skill with the protein and ligand structures to obtain the optimized pose and binding affinity.
Dependency Matrix
Required Modules
diffdockboltzchaideepmindequibindtankbindneuralplexergninaposebusters
Components
scriptsreferencesassets
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: docking-rescoring Download link: https://github.com/pradyumnasagar/open-research-skills/archive/main.zip#docking-rescoring Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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