miscellaneous

Provide PyMOL command patterns for visualization, selection, and scripting tasks.

3|Updated Jan 28, 2026
One-click install
npx skills add https://github.com/ANaka/claudemol --skill miscellaneous
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: miscellaneous
Source: https://github.com/ANaka/claudemol/tree/main/claude-plugin/skills/miscellaneous
Command: npx skills add https://github.com/ANaka/claudemol --skill miscellaneous

SYSTEM DOCUMENTATION & REQUIREMENTS

What problem does it solve?

Collection of useful PyMOL patterns and commands that don't fit into specific workflow skills. Use as reference for edge cases and less common operations.

Core Features & Use Cases

  • Reference PyMOL command patterns for visualization, selections, and session management
  • Demonstrated code blocks for common tasks (listing objects, counting atoms, selecting residues, exporting formats)
  • Useful for quick lookup when building custom workflows or teaching PyMOL basics

Quick Start

Ask for a PyMOL pattern or example and I will provide a ready-to-use snippet

Frequently Asked Questions about miscellaneous

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I select specific residues and count atoms in PyMOL?

PyMOL selection patterns allow you to isolate specific residues and count atoms using concise command snippets. This reference provides ready-to-use code blocks for quick selection tricks and measurement tasks.

What is the best way to list all objects and export formats in a PyMOL session?

Listing objects and exporting formats in a PyMOL session is handled by session management commands. This reference provides demonstrated code blocks for common tasks like listing objects and exporting formats.

Can I use these PyMOL command patterns for custom visualization workflows?

These PyMOL command patterns are designed for researchers and developers building custom visualization workflows. They provide quick lookup snippets for edge-case operations and less common visualization tasks.

Does this reference cover PyMOL scripting tasks and edge-case operations?

This PyMOL reference covers scripting tasks and edge-case operations that do not fit into specific workflow skills. It organizes examples by operation and shows code blocks for object management, selection, measurement, and scripting.

Why use a miscellaneous PyMOL pattern reference instead of searching documentation?

A miscellaneous PyMOL pattern reference consolidates edge-case commands and less common operations into ready-to-use snippets, avoiding the need to search through extensive documentation for quick lookup during custom workflow building.