protein-sequence-msa
OfficialAlign proteins to find conserved regions
Authorgoogle-deepmind
Version1.0.0
Installs0
System Documentation
What problem does it solve?
It solves the problem of comparing multiple protein sequences by computing a multiple sequence alignment so you can identify similarity and conservation across a set.
Core Features & Use Cases
- Multiple sequence alignment via EBI Clustal Omega: Produces an alignment for protein FASTA inputs using the EBI service.
- Scales to large datasets: Supports up to 4000 protein sequences and up to 4 MB input size.
- Objective-driven interpretation: Helps you assess similarity, domain conservation, and conservation of key residues by analyzing the produced alignment, without fabricating metrics.
Quick Start
Use the protein-sequence-msa skill to align your FASTA file by running the provided wrapper and saving the output alignment for downstream analysis.
Dependency Matrix
Required Modules
scienceskillscommonpython-dotenv
Components
scripts
💻 Claude Code Installation
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Please help me install this Skill: Name: protein-sequence-msa Download link: https://github.com/google-deepmind/science-skills/archive/main.zip#protein-sequence-msa Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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