quickgo-database

To retrieve Gene Ontology annotations for a specific taxon ID, you can query the EBI QuickGO REST API and filter the downloaded GO annotations by taxon ID, evidence code, and GO aspect. This efficiently fetches protein annotation sets for targeted species.

Yes, you can search for Gene Ontology terms by keyword using the EBI QuickGO API. This fetches matching GO term metadata, including the specific name, definition, and ontology aspect for each resolved GO ID.

You can navigate the Gene Ontology hierarchy by querying the EBI QuickGO API to retrieve ancestor and descendant GO term hierarchies. This ontology traversal maps the structural relationships between parent and child GO terms.

The best way to fetch GO annotations for UniProt accessions before enrichment analysis is querying the EBI QuickGO API. You retrieve annotation sets filtered by taxon ID and evidence codes to prepare clean, targeted protein function data.

Yes, you can filter downloaded GO annotations by evidence code and GO aspect. Querying the EBI QuickGO API allows you to constrain annotation retrieval to specific biological data, taxon IDs, and evidence types.

You need the requests library to query the EBI QuickGO REST API for GO terms. Pandas and matplotlib are included dependencies for structuring the retrieved annotation sets and visualizing ontology data within your bioinformatics workflow.