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schard

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Convert h5ad data to R Seurat objects smoothly.

Data & Analytics#r#single-cell#anndata#h5ad#seurat#visium
AuthorCHENyiru3
Version1.0.0
Installs0

System Documentation

What problem does it solve?

Convert h5ad single-cell data into R-native objects (Seurat or SingleCellExperiment) to enable downstream analysis in R without losing metadata or embeddings.

Core Features & Use Cases

  • h5ad to Seurat or SingleCellExperiment conversion preserving cell metadata and embeddings
  • Visium spatial transcriptomics support with integration of spatial coordinates
  • Easy interoperability with common AnnData structures for reproducible workflows

Quick Start

Convert an h5ad file to a Seurat or SingleCellExperiment object in R using schard.

Dependency Matrix

Required Modules

None required

Components

Standard package

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: schard
Download link: https://github.com/CHENyiru3/AI-Skills-Collections/archive/main.zip#schard

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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