anndatar
CommunityH5AD to R data exchange with no Python deps.
AuthorCHENyiru3
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Convert between .h5ad (AnnData) files and native R single-cell data objects using anndataR. Use this skill whenever you work with h5ad files, AnnData objects, converting between Python scanpy and R (Seurat/SingleCellExperiment), or moving single-cell data between Python and R ecosystems.
Core Features & Use Cases
- Read and write .h5ad files in pure R without Python dependencies.
- Convert AnnData objects to Seurat and SingleCellExperiment objects.
- Use case: migrate datasets from Python/scanpy to R for downstream analysis in Seurat or SCE.
Quick Start
Provide the path to your .h5ad file and specify the desired R object (Seurat or SingleCellExperiment) to obtain the converted data.
Dependency Matrix
Required Modules
None requiredComponents
Standard package💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: anndatar Download link: https://github.com/CHENyiru3/AI-Skills-Collections/archive/main.zip#anndatar Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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