scientific-gdc-portal
CommunitySearch cancer genomics data via the GDC API.
Data & Analytics#cancer-genomics#gene-expression#gdc#somatic-mutations#genomic-data-commons#case-metadata
Authornahisaho
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Provides a GDC portal to perform cross-project searches and retrieve case metadata, somatic mutations, gene expression, and file metadata using the GDC REST API.
Core Features & Use Cases
- Cross-project cancer genomics search across TCGA/TARGET cohorts.
- Retrieve case metadata and disease-specific statistics.
- Query somatic mutations (SSM) by gene and obtain gene expression data, plus file metadata for downloads.
Quick Start
Run the GDC portal to fetch summarized projects, cases, and SSM data for a given gene across cancer datasets.
Dependency Matrix
Required Modules
None requiredComponents
Standard package💻 Claude Code Installation
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Please help me install this Skill: Name: scientific-gdc-portal Download link: https://github.com/nahisaho/satori/archive/main.zip#scientific-gdc-portal Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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