scientific-monarch-ontology
CommunityDisorder-gene-phenotype insights via Monarch API.
Authornahisaho
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Monarch Initiative exposes disease-gene-phenotype associations and ontology-based analyses; this skill enables programmatic retrieval and systematic interpretation of disease, gene, and HPO data to accelerate biomedical research.
Core Features & Use Cases
- Retrieve disease-gene-phenotype associations via the Monarch API for research queries.
- Support inverse lookups (gene to disease) and phenotype-based querying, including HPO-term typing and semantic similarity estimation.
- Provide a deterministic pipeline for integrating disease-genes-phenotypes into downstream analyses and pipelines.
Quick Start
Run monarch_pipeline on a disease query to generate results and outputs.
Dependency Matrix
Required Modules
None requiredComponents
Standard package💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: scientific-monarch-ontology Download link: https://github.com/nahisaho/satori/archive/main.zip#scientific-monarch-ontology Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
Agent Skills Search Helper
Install a tiny helper to your Agent, search and equip skill from 471,000+ vetted skills library on demand.