scientific-rcsb-pdb-search

Community

Search PDB structures and fetch metadata.

Authornahisaho
Version1.0.0
Installs0

System Documentation

What problem does it solve?

RCSB PDB provides fragmented data; this skill unifies search, metadata retrieval, and ligand extraction via the PDB APIs to streamline structural bioinformatics workflows.

Core Features & Use Cases

  • RCSB PDB Search API integration for text and structured queries to discover relevant entries.
  • Metadata retrieval including resolution, authors, citations, and deposition dates.
  • Ligand data extraction from nonpolymer entities to enable ligand binding analysis.
  • Use Case: Assemble high-resolution structures with ligands for docking studies and comparative analyses.

Quick Start

Query RCSB PDB with a keyword and fetch metadata and ligands.

Dependency Matrix

Required Modules

None required

Components

Standard package

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: scientific-rcsb-pdb-search
Download link: https://github.com/nahisaho/satori/archive/main.zip#scientific-rcsb-pdb-search

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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