scientific-spatial-multiomics
CommunityUnify spatial omics data for actionable insights.
Authornahisaho
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This skill orchestrates the integration of spatial transcriptomics and spatial proteomics data to enable alignment, co-detection analysis, and spatial niche discovery.
Core Features & Use Cases
- Spatial data alignment between modalities (RNA and protein) to enable downstream correlative analyses.
- Space-aware codetection and neighborhood analysis to identify spatially co-localized features and cellular niches.
- End-to-end pipeline orchestration including data loading, alignment, codetection, and community detection, adaptable to MERFISH, Visium, CODEX datasets.
Quick Start
Execute the spatial-multiomics pipeline to load spatial RNA and protein modalities, perform alignment, codetection, and spatial community detection.
Dependency Matrix
Required Modules
None requiredComponents
Standard package💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: scientific-spatial-multiomics Download link: https://github.com/nahisaho/satori/archive/main.zip#scientific-spatial-multiomics Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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