wes-clinical-report-es

To generate a Spanish clinical report from WES data, run the Python script by specifying your report directory, output directory, and target sample. It translates English markdown input into a Spanish PDF with clinical interpretation and pharmacogenomic alerts.

Generating WES clinical reports in Spanish requires Python 3.9 or higher. You must also have the reportlab and pandas libraries installed to process the WES data and format the final PDF output.

A pharmacogenomics clinical report from whole exome sequencing includes translated clinical interpretations of WES data alongside specific pharmacogenomic alerts and follow-up recommendations for clinical workflows.

Yes, you can translate English markdown clinical interpretations into Spanish PDF output. The script processes English markdown input from WES data and produces a professional Spanish PDF report.

To automate Spanish PDF generation for WES samples, use the command line interface to specify your report and output directories. You can target specific samples like Sample3 for tailored clinical report generation.

WES clinical report generation fails when parsing markdown input if your Python environment is below version 3.9 or if the required pandas and reportlab dependencies are missing from your workflow setup.