Agent Skills by Alex
Showing 11 vetted skills indexed across 1 GitHub repositories.
alex-hhdesign-round-modal
Automate protein binder design rounds with BoltzGen or RFdiffusion3 on Modal GPUs.
alex-hhpropose-designs
Analyze protein design round results and propose next-round configurations.
alex-hhpgdh-evaluate
Synchronize and rank protein binder designs for the 15-PGDH target.
alex-hh/design-round — Complete Round Lifecycle
Orchestrate a complete protein design round from generation to publishing.
alex-hhlyceum_ipsae
Score predicted protein-protein interactions using ipSAE, pDockQ, pDockQ2, and LIS metrics.
alex-hhpgdh_ipsae
Score 15-PGDH binder designs using the ipSAE metric on Lyceum.
alex-hhpgdh_rfdiffusion3
Generate atomic-level protein binders for 15-PGDH using RFdiffusion3 on Lyceum.
alex-hh/bioltask — Biolyceum Task Runner
Load biolyceum task files and guide step-by-step execution with acceptance criteria tracking.
alex-hhpgdh-design
Orchestrate an end-to-end protein binder design pipeline for 15-PGDH.
alex-hhboltzgen-pgdh
Design protein binders for 15-PGDH using BoltzGen on Lyceum.
alex-hhpgdh_boltz2
Cross-validate 15-PGDH binder designs using Boltz-2 structure prediction.