Agent Skills by Hugh
Showing 49 vetted skills indexed across 3 GitHub repositories.
HughYauscientific-visualization
Create publication-ready scientific figures with matplotlib, seaborn, and plotly.
HughYaufigure-composer
Compose publication-grade multi-panel figures from a claim and data files.
HughYaulearn
Guides learners through concepts using Socratic tutoring and scaffolded instruction.
HughYauself-awareness
Query Claude Science session metadata, token usage, and execution history via SQLite.
HughYauusing-model-endpoint
Call registered model endpoints over their native HTTP APIs from scoped inference kernels.
HughYaualphafold2
Predicts protein monomer and multimer structures with AlphaFold2 via the ColabFold runner.
HughYausolublempnn
Generates solubility-biased protein sequences from backbone structures using SolubleMPNN inverse folding.
HughYauesmfold2
Predict protein, DNA, RNA, and ligand complex structures with ESMFold2 diffusion co-folding.
HughYauboltz
Predicts protein, nucleic-acid, and small-molecule complex structures with Boltz-2.
HughYauremote-compute-ssh
Orchestrates job submission, monitoring, and result harvesting on SSH and SLURM compute hosts.
HughYauligandmpnn
Design protein sequences around bound ligands, nucleic acids, and metals using LigandMPNN inverse folding.
HughYaualgorithmic-art
Creates generative art with p5.js using seeded randomness and interactive parameter controls.
HughYaupdf-explore
Parses PDFs once into persistent text and images for targeted page navigation and extraction.
HughYauscvi-tools
Trains scVI and scANVI models for batch-corrected single-cell RNA-seq embeddings and differential expression.
HughYauchai1
Predicts protein, nucleic-acid, and small-molecule complex structures with the Chai-1 diffusion model.
HughYauscgpt
Embed and annotate single-cell expression data with the scGPT foundation model.
HughYaudiffdock
Predict small-molecule binding poses against protein structures with DiffDock-L diffusion docking.
HughYauremote-compute-modal
Runs GPU jobs on the user's own Modal account via sandboxed containers.
HughYaumanaged-model-endpoints
Registers local container or remote API model endpoints with a daemon for on-demand inference.
HughYauliterature-review
Find, verify, and synthesize scientific literature using Crossref and OpenAlex APIs.
HughYauskill-creator
Create, evaluate, and iteratively improve AI agent skills with benchmarked testing.
HughYauindication-dossier
Generates a structured therapeutic indication dossier covering epidemiology, biology, standard of care, and clinical trials.
HughYaufair-esm2
Extract protein embeddings, mutation scores, and contact maps using Meta AI's ESM-2 models.
HughYaupaper-narrative
Reviews a manuscript's figure deck and restructures its narrative arc as a handling editor.