ChemClaw
Chemistry spectra prediction, structure conversion, and literature data extraction
All Skills in This Repository (26)
Pure Emerald Level Indicatorsboron-nmr-predict
Predict 11B NMR chemical shifts from SMILES using local CPU inference.
gjf-to-xyz
Parse Gaussian gjf input files and convert them to XYZ format.
chem-data-extractor
Extract chemical characterization data from PDFs and Markdown into strict JSON.
ms-spectra-simulation
Predict MS/MS spectra from SMILES via fioRa and save MSP, MGF, and PNG outputs.
surface_tension_predictor
Predict SMILES-based surface tension references using RDKit and Mordred descriptors.
chemical-file-converter
Convert chemical file formats with RDKit or Open Babel.
nmr-prediction
Predict per-atom 1H and 13C NMR chemical shifts from SMILES strings.
pka_predictor
Predict pKa values for small molecules from SMILES inputs.
mineru-pdf-converter
Convert PDF files to Markdown with images, tables, and formulas.
geometry-optimizer
Optimize molecular geometries from SMILES or XYZ inputs using xTB.
uv-vis-spectrum-simulation
Generate UV-Vis spectrum PNGs from SMILES strings via UV-adVISor.
iupac-to-smiles
Convert IUPAC chemical names to SMILES strings via OPSIN.
Frequently Asked Questions
FAQPage SchemaHow to install ChemClaw?▼
Run `npx skills add InternScience/ChemClaw --all -g -y` in your terminal to install all chemistry skills globally. To install a single skill, use `npx skills add InternScience/ChemClaw --skill mol-3d-viewer`.
How to predict NMR spectra from a SMILES string?▼
Use the nmr-prediction skill for 1H and 13C shifts via the NMRNet deep learning model, or boron-nmr-predict for boron-11 shifts. Both output per-atom ppm values and spectrum images.
Can ChemClaw extract reaction data from chemistry PDFs?▼
Yes. The reaction-data-extraction and chem-data-extractor skills parse PDFs into structured CSV or JSON, capturing catalysts, solvents, yields, NMR data, and HPLC conditions.
Does ChemClaw work with Claude Code and OpenClaw?▼
Yes. All skills follow the standard SKILL.md format and run in Claude Code, OpenClaw, Cursor, and other compatible agent environments.
Can I convert chemical file formats without coding?▼
Yes. Just ask in plain language to convert between XYZ, GJF, MOL, SDF, PDB, and SMILES formats, and the agent runs the chemical-file-converter scripts for you.
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