omics-target-evidence-mapper
CommunityAggregate evidence across omics and translational sources for targeted research.
AuthorMubasherMohammed
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Researchers require a streamlined way to assess gene or protein target evidence from various public sources. This skill automates the retrieval and organization of evidence for efficient research triage.
Core Features & Use Cases
- Evidence Aggregation: Consolidates target-level evidence from UniProt, Open Targets, PubMed, and ClinicalTrials.gov.
- Target & Disease Analysis: Supports retrieval of information based on gene/protein targets and optional disease context.
- Output Formats: Delivers machine-readable JSON and human-readable Markdown reports.
- Use Case: For a researcher studying the gene IL6R in coronary artery disease, this skill can quickly gather and present relevant evidence.
Quick Start
Run the following command to map evidence for the gene 'IL6R' in 'coronary artery disease':
omics-target-evidence-mapper --gene IL6R --disease "coronary artery disease" --output my_evidence_report
Dependency Matrix
Required Modules
requestsargparse
Components
scriptsreferences
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: omics-target-evidence-mapper Download link: https://github.com/MubasherMohammed/opencode-BioInfo/archive/main.zip#omics-target-evidence-mapper Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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