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opentrons-integration

Write Python protocols for Opentrons OT-2 and Flex liquid handling.

Updated Mar 10, 2026
Search Tags:#robotics#lab automation#opentrons#liquid handling#protocol api#pcr setup#serial dilution
One-click install
npx skills add https://github.com/felixboehm/biochem-allergy --skill opentrons-integration-felixboehm
Or copy as Structured Prompt for Agent▼
Please help me install this Agent Skill.
Skill: opentrons-integration
Source: https://github.com/felixboehm/biochem-allergy/tree/main/.claude/skills/opentrons-integration
Command: npx skills add https://github.com/felixboehm/biochem-allergy --skill opentrons-integration-felixboehm

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill includes scripts (resource) and references (resource) components.

What problem does it solve?

This Skill streamlines and automates complex liquid handling tasks on Opentrons robotic platforms, reducing manual errors and increasing throughput in laboratory settings.

Core Features & Use Cases

  • Protocol Development: Write and execute Python-based protocols for Opentrons OT-2 and Flex robots.
  • Hardware Control: Manage pipettes, modules (temperature, magnetic, thermocycler), and labware for precise automated workflows.
  • Use Case: Automate a 96-well plate assay by programming precise liquid transfers, temperature control for incubations, and magnetic bead purification steps, all executed by the Opentrons robot.

Quick Start

Use the opentrons-integration skill to write a Python protocol that transfers 100µL from source plate A1 to destination plate B1 using a p300 single-channel pipette.

Frequently Asked Questions about opentrons-integration

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I automate PCR setup and serial dilution workflows on an Opentrons robot?▼

Automate PCR setup and serial dilution workflows by writing Python protocols using the Protocol API v2 to control pipettes and modules on Opentrons OT-2 and Flex robots for precise liquid handling.

Can I control temperature, magnetic, and thermocycler modules with Opentrons liquid handling protocols?▼

Yes, Opentrons liquid handling protocols support full hardware control of temperature, magnetic, and thermocycler modules alongside pipettes to execute complex automated experimental workflows.

How do I transfer liquid between labware plates using an Opentrons Python protocol?▼

Transfer liquid between labware plates by defining source and destination wells in a Python protocol, specifying volumes, and assigning a compatible pipette to execute the automated liquid transfer.

Does the Opentrons Protocol API support both OT-2 and Flex robots for lab automation?▼

Yes, the Opentrons Protocol API v2 supports both OT-2 and Flex robots, enabling production-ready lab automation with comprehensive Python scripting capabilities for automated liquid handling.

What is the best way to write production-ready Python scripts for Opentrons lab automation?▼

Write production-ready Python scripts for Opentrons lab automation by utilizing the Protocol API v2 features to manage pipettes, labware, and modules for precise and complex experimental workflows.

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