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scientific-reactome-pathways

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Query Reactome pathways and map to UniProt.

Data & Analytics#bioinformatics#pathways#hierarchy#rest-api#reactome#uniprot
Authornahisaho
Version1.0.0
Installs0

System Documentation

What problem does it solve?

Enables researchers to search Reactome pathways by name or keyword, retrieve pathway hierarchy, and map UniProt accessions to pathways to support integrative bioinformatics workflows.

Core Features & Use Cases

  • Pathway search by name/keyword with detail retrieval.
  • Hierarchy extraction and navigation of Reactome pathways.
  • UniProt mapping for pathway participants and annotations.
  • Pathway diagram data retrieval for visualization and reporting.
  • Use Case: a biologist investigates MAPK signaling by locating the pathway, expanding its hierarchy, and mapping related UniProt entries for downstream experiments.

Quick Start

Query Reactome pathways by keyword to obtain pathway data and UniProt mappings.

Dependency Matrix

Required Modules

None required

Components

Standard package

💻 Claude Code Installation

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Please help me install this Skill:
Name: scientific-reactome-pathways
Download link: https://github.com/nahisaho/satori/archive/main.zip#scientific-reactome-pathways

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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