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scientific-toxicology-env

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CTD toxicology data pipelines.

Data & Analytics#bioinformatics#risk-assessment#pathway-analysis#high-throughput#toxicology#ctd#assays
Authornahisaho
Version1.0.0
Installs0

System Documentation

What problem does it solve?

Integrates CTD-based toxicology data to reveal chemical-gene-disease links and high-throughput screening patterns.

Core Features & Use Cases

  • Chemical-gene-disease queries: CTD-based searches tying chemicals to genes and diseases.
  • High-throughput toxicology data: Access Tox21/ToxCast assays and readouts for mechanistic insights.
  • Risk assessment references: Integrate IRIS risk values and T3DB toxin data for health impact evaluation.
  • Pipeline and enrichment: Supports pathway enrichment (e.g., KEGG via Enrichr) and data fusion for reproducible analyses.

Quick Start

Run a CTD-driven toxicology workflow to fetch gene interactions and disease associations for a chemical.

Dependency Matrix

Required Modules

None required

Components

Standard package

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: scientific-toxicology-env
Download link: https://github.com/nahisaho/satori/archive/main.zip#scientific-toxicology-env

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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