hannesillCommunity·24 Agent Skills Included

m4

Clinical research on MIMIC-IV and eICU with validated severity scores

Queries MIMIC-IV and eICU critical care databases through natural language, SQL, or Python. Calculates validated clinical scores like SOFA, SAPS-II, OASIS, KDIGO, and Charlson without manual schema work. Eliminates error-prone hand-written SQL and guides rigorous cohort studies with built-in bias checks.

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npx skills add hannesill/m4 --all -g -y

All Skills in This Repository (24)

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hannesill

m4-api

Access clinical datasets from Python and execute SQL queries to return DataFrames.

mimic-table-relationships

Clarify MIMIC-IV identifier hierarchies and join patterns for hospital and ICU tables.

create-m4-skill

Document the process of creating new M4 skills with structured frontmatter and provenance.

mimic-eicu-mapping

Map equivalent clinical concepts between MIMIC-IV and eICU databases.

m4-research

Guide clinical researchers through structured interviews to generate formal research protocols.

first-icu-stay

Identify first ICU stays and hospital admissions using MIMIC-IV derived fields.

baseline-creatinine

Compute baseline creatinine for AKI assessment using hierarchical rules and SQL.

sepsis-3-cohort

Identify Sepsis-3 patients using SOFA >= 2 and suspected infection criteria in ICU datasets.

vasopressor-equivalents

Compute norepinephrine-equivalent dose from concurrent vasopressors with time-interval aggregation.

lods-score

Calculate the Logistic Organ Dysfunction Score from first ICU day patient data.

gcs-calculation

Calculate Glasgow Coma Scale scores from ICU chart data with intubation handling.

apsiii-score

Compute APS III scores from first-day ICU data to predict hospital mortality.

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Frequently Asked Questions

FAQPage Schema

How to install M4?▼

Run `npx skills add hannesill/m4 --all -g -y` in your terminal to install all skills in this suite globally.

How to query MIMIC-IV without learning the schema?▼

M4 sets up MIMIC-IV or eICU as a fast local database and lets you ask questions in plain English, producing clinically correct SQL automatically.

Which clinical scores does M4 support?▼

It includes validated skills for SOFA, APACHE III/IV, SAPS-II, OASIS, LODS, SIRS, KDIGO AKI staging, MELD, Charlson, and Sepsis-3 cohort identification.

Does M4 work with Claude Code and Cursor?▼

Yes. All skills follow the universal SKILL.md standard and run in Claude Code, Cursor, Cline, Codex CLI, Gemini CLI, and GitHub Copilot.

Can I run full statistical analyses with M4?▼

Yes. The Python API returns pandas DataFrames, and the research workflow skill guides you through cohort definition, bias checks, and reproducible analysis scripts.